diff -udprN /usr/ports/science/PETSc/distinfo ./distinfo --- /usr/ports/science/PETSc/distinfo 2018-10-20 16:08:58.631171000 +0000 +++ ./distinfo 2019-10-29 07:33:01.314629000 +0000 @@ -1,3 +1,3 @@ -TIMESTAMP = 1540050650 -SHA256 (petsc-3.10.2.tar.gz) = 9d3381bcf9c63abe6521b21a88efc70f8e893293503cff497971d0d9c1ec68cc -SIZE (petsc-3.10.2.tar.gz) = 31083036 +TIMESTAMP = 1572334381 +SHA256 (petsc-3.12.1.tar.gz) = b72d895d0f4a79acb13ebc782b47b26d10d4e5706d399f533afcd5b3dba13737 +SIZE (petsc-3.12.1.tar.gz) = 34592587 diff -udprN /usr/ports/science/PETSc/Makefile ./Makefile --- /usr/ports/science/PETSc/Makefile 2019-09-15 10:39:17.159119000 +0000 +++ ./Makefile 2019-10-29 07:28:29.100593000 +0000 @@ -2,8 +2,7 @@ # $FreeBSD: head/science/PETSc/Makefile 512096 2019-09-15 10:39:17Z pkubaj $ PORTNAME= PETSc -DISTVERSION= 3.10.2 -PORTREVISION= 3 +DISTVERSION= 3.12.1 CATEGORIES= science devel MASTER_SITES= http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/ DISTNAME= ${PORTNAME:tl}-${DISTVERSION} @@ -16,7 +15,7 @@ LICENSE_FILE= ${WRKSRC}/LICENSE LIB_DEPENDS= libmpich.so:net/mpich -USES= blaslapack fortran gmake python:2.7 shebangfix +USES= blaslapack fortran gmake python:2.7 shebangfix xorg GNU_CONFIGURE= yes CONFIGURE_ARGS= --with-shared-libraries=1 \ --with-mpi-dir=${LOCALBASE} \ @@ -26,7 +25,9 @@ CONFIGURE_ARGS_amd64= CFLAGS="${CFLAGS} CONFIGURE_ARGS_i386= CFLAGS="${CFLAGS} -msse2" CXXFLAGS="${CXXFLAGS} -msse2" USE_XORG= x11 MAKEFILE= makefile -SHEBANG_FILES= lib/petsc/bin/*.py lib/petsc/bin/saws/SAWs.py lib/petsc/bin/saws/*.bash config/*.py +SHEBANG_FILES= lib/petsc/bin/*.py lib/petsc/bin/saws/SAWs.py\ + lib/petsc/bin/saws/*.bash config/*.py\ + lib/petsc/bin/petsc-performance-view lib/petsc/bin/petscnagfor USE_LDCONFIG= yes TEST_TARGET= test BINARY_ALIAS= python=${PYTHON_CMD} diff -udprN /usr/ports/science/PETSc/pkg-descr ./pkg-descr --- /usr/ports/science/PETSc/pkg-descr 2017-12-21 00:26:58.894355000 +0000 +++ ./pkg-descr 2019-10-07 04:14:32.809478000 +0000 @@ -4,4 +4,4 @@ MPI, and GPUs through CUDA or OpenCL, as PETSc (sometimes called PETSc/Tao) also contains the Tao optimization software library. -WWW: http://www.mcs.anl.gov/petsc +WWW: https://www.mcs.anl.gov/petsc/ diff -udprN /usr/ports/science/PETSc/pkg-plist ./pkg-plist --- /usr/ports/science/PETSc/pkg-plist 2018-10-02 23:11:15.498144000 +0000 +++ ./pkg-plist 2019-10-29 07:47:31.338242000 +0000 @@ -34,6 +34,8 @@ include/petsc/private/dmmbimpl.h include/petsc/private/dmnetworkimpl.h include/petsc/private/dmpatchimpl.h include/petsc/private/dmpleximpl.h +include/petsc/private/dmproductimpl.h +include/petsc/private/dmstagimpl.h include/petsc/private/dmswarmimpl.h include/petsc/private/drawimpl.h include/petsc/private/dtimpl.h @@ -44,6 +46,7 @@ include/petsc/private/glvisviewerimpl.h include/petsc/private/hashmap.h include/petsc/private/hashmapi.h include/petsc/private/hashmapij.h +include/petsc/private/hashmapiv.h include/petsc/private/hashset.h include/petsc/private/hashseti.h include/petsc/private/hashsetij.h @@ -68,16 +71,21 @@ include/petsc/private/petscdsimpl.h include/petsc/private/petscfeimpl.h include/petsc/private/petscfptimpl.h include/petsc/private/petscfvimpl.h +include/petsc/private/petschpddm.h +include/petsc/private/petschypre.h include/petsc/private/petscimpl.h +include/petsc/private/sectionimpl.h include/petsc/private/sfimpl.h include/petsc/private/snesimpl.h include/petsc/private/taoimpl.h include/petsc/private/taolinesearchimpl.h +include/petsc/private/tshistoryimpl.h include/petsc/private/tsimpl.h include/petsc/private/vecimpl.h include/petsc/private/vecscatterimpl.h include/petsc/private/vieweradios2impl.h include/petsc/private/vieweradiosimpl.h +include/petsc/private/viewerhdf5impl.h include/petsc/private/viewerimpl.h include/petscao.h include/petscao.mod @@ -92,7 +100,8 @@ include/petscconf.h include/petscconfiginfo.h include/petscconvest.h include/petscctable.h -include/petsccuda.h +include/petsccublas.h +include/petsccxxcomplexfix.h include/petscdef.mod include/petscdm.h include/petscdm.mod @@ -121,9 +130,12 @@ include/petscdmpatchdef.mod include/petscdmplex.h include/petscdmplex.mod include/petscdmplexdef.mod +include/petscdmplextypes.h +include/petscdmproduct.h include/petscdmredundant.h include/petscdmshell.h include/petscdmsliced.h +include/petscdmstag.h include/petscdmswarm.h include/petscdmtypes.h include/petscdraw.h @@ -138,7 +150,6 @@ include/petscfetypes.h include/petscfix.h include/petscfv.h include/petscfvtypes.h -include/petscgll.h include/petscis.h include/petscis.mod include/petscisdef.mod @@ -148,6 +159,7 @@ include/petscksp.h include/petscksp.mod include/petsckspdef.mod include/petsckspdefdummy.mod +include/petsclayouthdf5.h include/petsclog.h include/petscmachineinfo.h include/petscmat.h @@ -166,6 +178,9 @@ include/petscpcdef.mod include/petscpcdefdummy.mod include/petscpctypes.h include/petscpf.h +include/petscpkg_version.h +include/petscsection.h +include/petscsectiontypes.h include/petscsf.h include/petscsftypes.h include/petscsnes.h @@ -176,6 +191,7 @@ include/petscsys.h include/petscsys.mod include/petscsysdef.mod include/petscsysdefdummy.mod +include/petscsystypes.h include/petsctao.h include/petsctao.mod include/petsctaodef.mod @@ -203,17 +219,23 @@ lib/libpetsc.so.%%SHLIB%% lib/petsc/bin/PetscBinaryIO.py lib/petsc/bin/PetscBinaryIOTrajectory.py lib/petsc/bin/PetscBinaryIO_tests.py +lib/petsc/bin/configureTAS.py +lib/petsc/bin/extract.py lib/petsc/bin/petsc_conf.py lib/petsc/bin/petsc_gen_xdmf.py +lib/petsc/bin/petsc_tas_analysis.py +lib/petsc/bin/petsc_tas_style.mplstyle +lib/petsc/bin/petsc-performance-view lib/petsc/bin/petscdiff lib/petsc/bin/petsclogformat.py lib/petsc/bin/petscmpiexec +lib/petsc/bin/petscnagfor lib/petsc/bin/petscnagupgrade.py lib/petsc/bin/saws/SAWs.py lib/petsc/bin/saws/getSAWs.bash lib/petsc/bin/saws/getStack.bash lib/petsc/bin/taucc.py -lib/petsc/conf/PETScBuildInternal.cmake +lib/petsc/conf/configure-hash lib/petsc/conf/modules/petsc/%%SHLIB%% lib/petsc/conf/petscrules lib/petsc/conf/petscvariables @@ -223,11 +245,14 @@ lib/petsc/conf/test lib/petsc/conf/test.common lib/petsc/conf/variables libdata/pkgconfig/PETSc.pc +%%DATADIR%%/Makefile.user %%DATADIR%%/datafiles/matrices/amesos2_test_mat0.mtx %%DATADIR%%/datafiles/matrices/hpd-complex-int32-float32 %%DATADIR%%/datafiles/matrices/hpd-complex-int32-float64 %%DATADIR%%/datafiles/matrices/hpd-complex-int64-float32 %%DATADIR%%/datafiles/matrices/hpd-complex-int64-float64 +%%DATADIR%%/datafiles/matrices/LFAT5.mtx +%%DATADIR%%/datafiles/matrices/m_05_05_crk.mtx %%DATADIR%%/datafiles/matrices/nh-complex-int32-float32 %%DATADIR%%/datafiles/matrices/nh-complex-int32-float64 %%DATADIR%%/datafiles/matrices/nh-complex-int64-float32 @@ -243,6 +268,8 @@ libdata/pkgconfig/PETSc.pc %%DATADIR%%/datafiles/matrices/spd-real-int64-float64 %%DATADIR%%/datafiles/matrices/tiny_system %%DATADIR%%/datafiles/matrices/tiny_system_with_x0 +%%DATADIR%%/datafiles/matrices/tiny_system_with_x0_complex.mat +%%DATADIR%%/datafiles/matrices/tiny_system_with_x0.mat %%DATADIR%%/datafiles/matrices/tiny_system_x0 %%DATADIR%%/datafiles/meshes/2Dgrd.exo %%DATADIR%%/datafiles/meshes/FourBrickHex-large.exo @@ -253,20 +280,33 @@ libdata/pkgconfig/PETSc.pc %%DATADIR%%/datafiles/meshes/Rect-tri3.exo %%DATADIR%%/datafiles/meshes/TwoQuads.exo %%DATADIR%%/datafiles/meshes/annulus-20.exo +%%DATADIR%%/datafiles/meshes/barycentricallyrefinedcube.h5 %%DATADIR%%/datafiles/meshes/blockcylinder-50.exo %%DATADIR%%/datafiles/meshes/blockcylinder-50.h5 %%DATADIR%%/datafiles/meshes/blockcylinder-50.xmf %%DATADIR%%/datafiles/meshes/cow.msh %%DATADIR%%/datafiles/meshes/cube_5tets.cas %%DATADIR%%/datafiles/meshes/cube_5tets_ascii.cas -%%DATADIR%%/datafiles/meshes/cube_periodic.msh -%%DATADIR%%/datafiles/meshes/cube_periodic_bin.msh %%DATADIR%%/datafiles/meshes/cylinder.med %%DATADIR%%/datafiles/meshes/doublet-tet.msh +%%DATADIR%%/datafiles/meshes/gmsh-3d-ascii-32.msh +%%DATADIR%%/datafiles/meshes/gmsh-3d-ascii-64.msh +%%DATADIR%%/datafiles/meshes/gmsh-3d-ascii.msh2 +%%DATADIR%%/datafiles/meshes/gmsh-3d-ascii.msh4 +%%DATADIR%%/datafiles/meshes/gmsh-3d-binary-32.msh +%%DATADIR%%/datafiles/meshes/gmsh-3d-binary-64.msh +%%DATADIR%%/datafiles/meshes/gmsh-3d-binary.msh2 +%%DATADIR%%/datafiles/meshes/gmsh-3d-binary.msh4 +%%DATADIR%%/datafiles/meshes/gmsh-3d.geo %%DATADIR%%/datafiles/meshes/grid_c.cgns %%DATADIR%%/datafiles/meshes/horse.ply.bz2 +%%DATADIR%%/datafiles/meshes/hybrid_3d_cube.msh +%%DATADIR%%/datafiles/meshes/hybrid_hexwedge.exo +%%DATADIR%%/datafiles/meshes/hybrid_hexwedge.msh %%DATADIR%%/datafiles/meshes/hybrid_tetwedge.msh %%DATADIR%%/datafiles/meshes/hybrid_triquad.msh +%%DATADIR%%/datafiles/meshes/mesh-3d-box-innersphere_bin.msh +%%DATADIR%%/datafiles/meshes/mesh-3d-box-innersphere.msh %%DATADIR%%/datafiles/meshes/sevenside-quad-15.exo %%DATADIR%%/datafiles/meshes/sevenside-quad.exo %%DATADIR%%/datafiles/meshes/sevenside.exo